Publications

2009

Sequencing, B G, Consortium A, Elsik CG., Tellam RL., Worley KC., Gibbs RA., Muzny DM., Weinstock GM., Adelson DL., Eichler EE. et al..  2009.  The genome sequence of taurine cattle: a window to ruminant biology and evolution.. Science. 324:522–528. Abstract
Pubmed

2008

Djebali, S, Kapranov P, Foissac S, Lagarde J, Reymond A, Ucla C, Wyss C, Drenkow J, Dumais E, Murray RR. et al..  2008.  Efficient targeted transcript discovery via array-based normalization of RACE libraries.. Nat. Methods. 5:629–635. Abstract
Pubmed

2007

Denoeud, F, Kapranov P, Ucla C, Frankish A, Castelo R, Drenkow J, Lagarde J, Alioto T, Manzano C, Chrast J et al..  2007.  Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions.. Genome Res.. 17:746–759. Abstract
Pubmed
Washietl, S, Pedersen JS., Korbel JO., Stocsits C, Gruber AR., Hackermüller J, Hertel J, Lindemeyer M, Reiche K, Tanzer A et al..  2007.  Structured RNAs in the ENCODE selected regions of the human genome.. Genome Res.. 17:852–864. Abstract
Pubmed
Consortium, ENCODE P, Birney E, Stamatoyannopoulos JA., Dutta A, Guigó R, Gingeras TR., Margulies EH., Weng Z, Snyder M, Dermitzakis ET. et al..  2007.  Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.. Nature. 447:799–816. Abstract
Pubmed

2005

Castelo, R, Reymond A, Wyss C, Câmara F, Parra G, Antonarakis SE., Guigó R, Eyras E.  2005.  Comparative gene finding in chicken indicates that we are closing in on the set of multi-exonic widely expressed human genes.. Nucleic Acids Res.. 33:1935–1939. Abstract
Pubmed
Eyras, E, Reymond A, Castelo R, Bye JM., Câmara F, Flicek P, Huckle EJ., Parra G, Shteynberg DD., Wyss C et al..  2005.  Gene finding in the chicken genome.. BMC Bioinformatics. 6:131. Abstract
Pubmed