Publications

2010

Manichanh, C, Reeder J, Gibert P, Varela E, Llopis M, Antolin M, Guigo R, Knight R, Guarner F.  2010.  Reshaping the gut microbiome with bacterial transplantation and antibiotic intake.. Genome research. Abstract
Pubmed
Montgomery, SB., Sammeth M, Gutierrez-Arcelus M, Lach RP., Ingle C, Nisbett J, Guigo R, Dermitzakis ET..  2010.  Transcriptome genetics using second generation sequencing in a Caucasian population. Nature. 464:773–777. Abstract
Pubmed

2009

Takeuchi, A, Schmitt D, Chapple C, Babaylova E, Karpova G, Guigo R, Krol A, Allmang C.  2009.  A short motif in Drosophila SECIS Binding Protein 2 provides differential binding affinity to SECIS RNA hairpins.. Nucleic Acids Res.. 37:2126–2141. Abstract
Pubmed
Boj, SF., Servitja JM., Martin D, Rios M, Talianidis I, Guigo R, Ferrer J.  2009.  Functional targets of the monogenic diabetes transcription factors HNF-1alpha and HNF-4alpha are highly conserved between mice and humans.. Diabetes. 58:1245–1253. Abstract
Pubmed

2008

Consortium, STAR, Saar K, Beck A, Bihoreau MT., Birney E, Brocklebank D, Chen Y, Cuppen E, Demonchy S, Dopazo J et al..  2008.  SNP and haplotype mapping for genetic analysis in the rat.. Nat. Genet.. 40:560–566. Abstract
Pubmed
Consortium, BM, Wilkinson MD., Senger M, Kawas E, Bruskiewich R, Gouzy J, Noirot C, Bardou P, Ng A, Haase D et al..  2008.  Interoperability with Moby 1.0–it's better than sharing your toothbrush!. Brief. Bioinformatics. 9:220–231. Abstract
Pubmed
Manichanh, C, Chapple CE., Frangeul L, Gloux K, Guigo R, Dore J.  2008.  A comparison of random sequence reads versus 16S rDNA sequences for estimating the biodiversity of a metagenomic library.. Nucleic Acids Res.. 36:5180–5188. Abstract
Pubmed

2007

Tress, ML., Martelli PL., Frankish A, Reeves GA., Wesselink JJ., Yeats C, Olason PI., Albrecht M, Hegyi H, Giorgetti A et al..  2007.  The implications of alternative splicing in the ENCODE protein complement.. Proc. Natl. Acad. Sci. U.S.A.. 104:5495–5500. Abstract
Pubmed
Consortium, D G12, Clark AG., Eisen MB., Smith DR., Bergman CM., Oliver B, Markow TA., Kaufman TC., Kellis M, Gelbart W et al..  2007.  Evolution of genes and genomes on the Drosophila phylogeny.. Nature. 450:203–218. Abstract
Pubmed
Lyle, R, Prandini P, Osoegawa K, ten Hallers B, Humphray S, Zhu B, Eyras E, Castelo R, Bird CP., Gagos S et al..  2007.  Islands of euchromatin-like sequence and expressed polymorphic sequences within the short arm of human chromosome 21.. Genome Res.. 17:1690–1696. Abstract
Pubmed