Publications

2011

Consortium, ENCODE P, Myers RM., Stamatoyannopoulos J, Snyder M, Dunham I, Hardison RC., Bernstein BE., Gingeras TR., Kent WJ., Birney E et al..  2011.  A user's guide to the encyclopedia of DNA elements (ENCODE).. PLoS Biol.. 9:e1001046. Abstract
Pubmed
Consortium, ENCODE P, Myers RM., Stamatoyannopoulos J, Snyder M, Dunham I, Hardison RC., Bernstein BE., Gingeras TR., Kent WJ., Birney E et al..  2011.  A user's guide to the encyclopedia of DNA elements (ENCODE).. PLoS Biol.. 9:e1001046. Abstract
Pubmed

2008

Consortium, STAR, Saar K, Beck A, Bihoreau MT., Birney E, Brocklebank D, Chen Y, Cuppen E, Demonchy S, Dopazo J et al..  2008.  SNP and haplotype mapping for genetic analysis in the rat.. Nat. Genet.. 40:560–566. Abstract
Pubmed

2007

Tress, ML., Martelli PL., Frankish A, Reeves GA., Wesselink JJ., Yeats C, Olason PI., Albrecht M, Hegyi H, Giorgetti A et al..  2007.  The implications of alternative splicing in the ENCODE protein complement.. Proc. Natl. Acad. Sci. U.S.A.. 104:5495–5500. Abstract
Pubmed
Consortium, ENCODE P, Birney E, Stamatoyannopoulos JA., Dutta A, Guigó R, Gingeras TR., Margulies EH., Weng Z, Snyder M, Dermitzakis ET. et al..  2007.  Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.. Nature. 447:799–816. Abstract
Pubmed

2006

Guigó, R, Flicek P, Abril JF., Reymond A, Lagarde J, Denoeud F, Antonarakis S, Ashburner M, Bajic VB., Birney E et al..  2006.  EGASP: the human ENCODE Genome Annotation Assessment Project.. Genome Biol.. 7 Suppl 1:S2.1–S231. Abstract
Pubmed

2005

Eyras, E, Reymond A, Castelo R, Bye JM., Câmara F, Flicek P, Huckle EJ., Parra G, Shteynberg DD., Wyss C et al..  2005.  Gene finding in the chicken genome.. BMC Bioinformatics. 6:131. Abstract
Pubmed

2004

Gibbs, RA., Weinstock GM., Metzker ML., Muzny DM., Sodergren EJ., Scherer S, Scott G, Steffen D, Worley KC., Burch PE. et al..  2004.  Genome sequence of the Brown Norway rat yields insights into mammalian evolution.. Nature. 428:493–521. Abstract
Pubmed

2002

Holt, RA., Subramanian GM., Halpern A, Sutton GG., Charlab R, Nusskern DR., Wincker P, Clark AG., Ribeiro JM., Wides R et al..  2002.  The genome sequence of the malaria mosquito Anopheles gambiae.. Science. 298:129–149. Abstract
Pubmed
Consortium, M G S, Waterston RH., Lindblad-Toh K, Birney E, Rogers J, Abril JF., Agarwal P, Agarwala R, Ainscough R, Alexandersson M et al..  2002.  Initial sequencing and comparative analysis of the mouse genome.. Nature. 420:520–562. Abstract
Pubmed