Publications

2011

Neurohr G, Naegeli A, Titos I, Theler D, Greber B, Díez J, Gabaldón T, Mendoza M, Barral Y.  2011.  A midzone-based ruler adjusts chromosome compaction to anaphase spindle length.. Science. 332:465–468. Abstract
Pubmed
Huerta-Cepas J, Dopazo J, Huynen MA, Gabaldón T.  2011.  Evidence for short-time divergence and long-time conservation of tissue-specific expression after gene duplication.. Briefings in bioinformatics. Abstract
Pubmed
Consortium ENCODEP, Myers RM, Stamatoyannopoulos J, Snyder M, Dunham I, Hardison RC, Bernstein BE, Gingeras TR, Kent WJ, Birney E et al..  2011.  A user's guide to the encyclopedia of DNA elements (ENCODE).. PLoS Biol.. 9:e1001046. Abstract
Pubmed
Di Tommaso P, Moretti S, Xenarios I, Orobitg M, Montanyola A, Chang JM, Taly JF, Notredame C.  2011.  T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension.. Nucleic acids research. Abstract
Pubmed
Martin D, Pantoja C, Miñán AF, Valdes-Quezada C, Moltó E, Matesanz F, Bogdanović O, de la Calle-Mustienes E, Domínguez O, Taher L et al..  2011.  Genome-wide CTCF distribution in vertebrates defines equivalent sites that aid the identification of disease-associated genes. Nat. Struct. Mol. Biol.. 18:708–714. Abstract
Pubmed
Puente XS, Pinyol M, Quesada V, Conde L, Ordonez GR, Villamor N, Escaramis G, Jares P, Bea S, González-Díaz M et al..  2011.  Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia. Nature. Abstract
Pubmed
Bellucci M, Agostini F, Masin M, Tartaglia GG.  2011.  Predicting protein associations with long noncoding RNAs. Nat. Methods. 8:444–445.
Pubmed
Mossuto MF, Bolognesi B, Guixer B, Dhulesia A, Agostini F, Janet R, Kumita JR, Tartaglia GG, Dumoulin M, Dobson CM et al..  2011.  Disulfide bonds reduce the toxicity of the amyloid fibrils formed by an extracellular protein. Angew Chem Intl Ed.
Mudge JM, Frankish A, Fernandez-Banet J, Alioto T, Derrien T, Howald C, Reymond A, Guigo R, Hubbard T, Harrow J.  2011.  The origins, evolution and functional potential of alternative splicing in vertebrates. Molecular biology and evolution. Abstract
Pubmed
Orom UA, Derrien T, Guigo R, Shiekhattar R.  2011.  Long Noncoding RNAs as Enhancers of Gene Expression. Cold Spring Harbor symposia on quantitative biology. Abstract
Pubmed