gene prediction

Selenoprofiles 3

Gene Prediction/Genome Annotation

We are continually working on the development of geneid, an ab initio gene prediction program, and SGP2 a comparative gene finder. We currently have more than fifty parameter files for gene prediction in a wide range of species spanning all Kingdoms of life.

Sarah Djebali

CRG
CRG ID: 
499
Membership Date: 
Fri, 2008-02-01 - Mon, 2019-07-01

Selenoprofiles2

mmariotti

CRG
CRG ID: 
627
Membership Date: 
Sat, 2008-01-05 - Sat, 2019-01-05

Computational Biology of RNA Processing

Group leader:  Roderic Guigó
Investigation of sequence patterns in the genome responsible for functionality

Research in our group focuses on the investigation of the signals involved in gene specification in genomic sequences (promoter elements, splice sites, translation initiation sites, etc…). We are interested both in the mechanism of their recognition and processing, and in their evolution. In addition, but related to this basic component of our research, our group is also involved in the development of software for gene prediction and annotation in genomic sequences.

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